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LIKELIHOOD_FUNCTION_OUTPUT
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Constant
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Controls how likelihood function is printed by fprintf.
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Syntax
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LIKELIHOOD_FUNCTION_OUTPUT=0,1,2,3,4 or 5;
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Notes
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0 - print just the likelihood function value; 1 - print the likelihood function value followed by a list of parameter values; 2(default) - print the likelihood function value followed by tree strings with only branch lengths; 3 - print the list of parameters and constraints; 4 -print a list of parameters, with values and constraints as a HyPhy batch language statement. May be useful for saving
and restoring parameter estimates. 5 - same as 4, except that all tree declarations are also included.
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Examples
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Last modified: 8/21/2002 |
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